Protein ZmHB8
ZmHB8 is a protein in the Homeobox family.
Information
TF Name: ZmHB8
Species: Maize
TF Family: Homeobox
Gene Name(Synonym): HB8
Uniprot ID: A0A1D6PDQ1
Subgenome: 1

Protein ZmHB8

ZmHB8 is a protein in the Homeobox family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF00046PF03789PF03790PF03791PF05920
Zm00001eb058930_T002
Zm00001eb058930_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d034212DAPseq no logo sequence fimo position
Zm00001d034212DAPseq no logo sequence fimo position
Zm00001d034212ChIPseq no logo sequence fimo position
Zm00001d034212PChIPseq no logo sequence fimo position

Interactions where ZmHB8 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmHB8 is the target  
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There are 41 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb058930_T002 from maize genome v5

Amino Acid Sequence
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MDSFGDLGGGGSSSSRAASAPFLQLPLPASTSSAQQQVLFPLPDGPQQQHHHHSSRIPLRQLLLLADPSSAAQHSASHRT
KDMATVQGEMSSPAVDGDADAIKARIMSHPQYSALLAAYLDCQKVGAPPDVSDRLSAMAAANLDAQPGPISRRRGPTTTR
ADDPELDQFMEAYCNMLVKFHEEMARPIQEATEFFNSMERQLGSTISDSNCEVAGSSEDEQDASWPEEIDPCAEDKELKH
QLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALAETTGLDPKQINNWFINQRKRHWKP
ASEDMPFAVMEGGFHVAQGTAALYMDRPAVPPFMADGGMYRLGS

MDSFGDLGGGGSSSSRAASAPFLQLPLPASTSSAQQQVLFPLPDGPQQQHHHHSSRIPLRQLLLLADPSSAAQHSASHRT
KDMATVQGEMSSPAVDGDADAIKARIMSHPQYSALLAAYLDCQKVGAPPDVSDRLSAMAAANLDAQPGPISRRRGPTTTR
ADDPELDQFMEAYCNMLVKFHEEMARPIQEATEFFNSMERQLGSTISDSNCEVAGSSEDEQDASWPEEIDPCAEDKELKH
QLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALAETTGLDPKQINNWFINQRKRHWKP
ASEDMPFAVMEGGFHVAQGTAALYMDRPAVPPFMADGGMYRLGS

MDSFGDLGGGGSSSSRAASAPFLQLPLPASTSSAQQQVLFPLPDGPQQQHHHHSSRIPLRQLLLLADPSSAAQHSASHRT
KDMATVQGEMSSPAVDGDADAIKARIMSHPQYSALLAAYLDCQKVGAPPDVSDRLSAMAAANLDAQPGPISRRRGPTTTR
ADDPELDQFMEAYCNMLVKFHEEMARPIQEATEFFNSMERQLGSTISDSNCEVAGSSEDEQDASWPEEIDPCAEDKELKH
QLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALAETTGLDPKQINNWFINQRKRHWKP
ASEDMPFAVMEGGFHVAQGTAALYMDRPAVPPFMADGGMYRLGS

MDSFGDLGGGGSSSSRAASAPFLQLPLPASTSSAQQQVLFPLPDGPQQQHHHHSSRIPLRQLLLLADPSSAAQHSASHRT
KDMATVQGEMSSPAVDGDADAIKARIMSHPQYSALLAAYLDCQKVGAPPDVSDRLSAMAAANLDAQPGPISRRRGPTTTR
ADDPELDQFMEAYCNMLVKFHEEMARPIQEATEFFNSMERQLGSTISDSNCEVAGSSEDEQDASWPEEIDPCAEDKELKH
QLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALAETTGLDPKQINNWFINQRKRHWKP
ASEDMPFAVMEGGFHVAQGTAALYMDRPAVPPFMADGGMYRLGS

MDSFGDLGGGGSSSSRAASAPFLQLPLPASTSSAQQQVLFPLPDGPQQQHHHHSSRIPLRQLLLLADPSSAAQHSASHRT
KDMATVQGEMSSPAVDGDADAIKARIMSHPQYSALLAAYLDCQKVGAPPDVSDRLSAMAAANLDAQPGPISRRRGPTTTR
ADDPELDQFMEAYCNMLVKFHEEMARPIQEATEFFNSMERQLGSTISDSNCEVAGSSEDEQDASWPEEIDPCAEDKELKH
QLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALAETTGLDPKQINNWFINQRKRHWKP
ASEDMPFAVMEGGFHVAQGTAALYMDRPAVPPFMADGGMYRLGS

MDSFGDLGGGGSSSSRAASAPFLQLPLPASTSSAQQQVLFPLPDGPQQQHHHHSSRIPLRQLLLLADPSSAAQHSASHRT
KDMATVQGEMSSPAVDGDADAIKARIMSHPQYSALLAAYLDCQKVGAPPDVSDRLSAMAAANLDAQPGPISRRRGPTTTR
ADDPELDQFMEAYCNMLVKFHEEMARPIQEATEFFNSMERQLGSTISDSNCEVAGSSEDEQDASWPEEIDPCAEDKELKH
QLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALAETTGLDPKQINNWFINQRKRHWKP
ASEDMPFAVMEGGFHVAQGTAALYMDRPAVPPFMADGGMYRLGS

MDSFGDLGGGGSSSSRAASAPFLQLPLPASTSSAQQQVLFPLPDGPQQQHHHHSSRIPLRQLLLLADPSSAAQHSASHRT
KDMATVQGEMSSPAVDGDADAIKARIMSHPQYSALLAAYLDCQKVGAPPDVSDRLSAMAAANLDAQPGPISRRRGPTTTR
ADDPELDQFMEAYCNMLVKFHEEMARPIQEATEFFNSMERQLGSTISDSNCEVAGSSEDEQDASWPEEIDPCAEDKELKH
QLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALAETTGLDPKQINNWFINQRKRHWKP
ASEDMPFAVMEGGFHVAQGTAALYMDRPAVPPFMADGGMYRLGS

MDSFGDLGGGGSSSSRAASAPFLQLPLPASTSSAQQQVLFPLPDGPQQQHHHHSSRIPLRQLLLLADPSSAAQHSASHRT
KDMATVQGEMSSPAVDGDADAIKARIMSHPQYSALLAAYLDCQKVGAPPDVSDRLSAMAAANLDAQPGPISRRRGPTTTR
ADDPELDQFMEAYCNMLVKFHEEMARPIQEATEFFNSMERQLGSTISDSNCEVAGSSEDEQDASWPEEIDPCAEDKELKH
QLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALAETTGLDPKQINNWFINQRKRHWKP
ASEDMPFAVMEGGFHVAQGTAALYMDRPAVPPFMADGGMYRLGS

MDSFGDLGGGGSSSSRAASAPFLQLPLPASTSSAQQQVLFPLPDGPQQQHHHHSSRIPLRQLLLLADPSSAAQHSASHRT
KDMATVQGEMSSPAVDGDADAIKARIMSHPQYSALLAAYLDCQKVGAPPDVSDRLSAMAAANLDAQPGPISRRRGPTTTR
ADDPELDQFMEAYCNMLVKFHEEMARPIQEATEFFNSMERQLGSTISDSNCEVAGSSEDEQDASWPEEIDPCAEDKELKH
QLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALAETTGLDPKQINNWFINQRKRHWKP
ASEDMPFAVMEGGFHVAQGTAALYMDRPAVPPFMADGGMYRLGS

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF03790
PF03791
PF03789
PF05920
PF00046
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Nucleotide Sequence
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CAAAGCCAGCCACCAGCCCACACAC...

GRMZM2G135447_T01 from maize genome v3


Related TFome: pUT3189

Amino Acid Sequence
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MDSFGDLGGGGSSSSRAASAPFLQLPLPASTSSAQQQVLFPLPDGPQQQHHHHSSRIPLRQLLLLADPSSAAQHSASHRT
KDMATVQGEMSSPAVDGDADAIKARIMSHPQYSALLAAYLDCQKVGAPPDVSDRLSAMAAANLDAQPGPISRRRGPTTTR
ADDPELDQFMEAYCNMLVKFHEEMARPIQEATEFFNSMERQLGSTISDSNCEVAGSSEDEQDASWPEEIDPCAEDKELKH
QLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALAETTGLDPKQINNWFINQRKRHWKP
ASEDMPFAVMEGGFHVAQGTAALYMDRPAVPPFMADGGMYRLGS

Nucleotide Sequence
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CAAAGCCAGCCACCAGCCCACACAC...

Zm00001d034212_T001 from maize genome v4

Amino Acid Sequence
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MDSFGDLGGGGSSSSRAASAPFLQLPLPASTSSSAQQQQVFPPPDGPQQQHYHHSSRIPLRQLLLLADPSSAAQHSHRKA
DMATVQGEMSSPAADGDADAIKARIMSHPHRNKEASYSDAMDSFGDLGGGGSSSSRAASAPFLQLPLPASTSSAQQQVLF
PLPDGPQQQHHHHSSRIPLRQLLLLADPSSAAQHSASHRTKDMATVQGEMSSPAVDGDADAIKARIMSHPQYSALLAAYL
DCQKVGAPPDVSDRLSAMAAANLDAQPGPISRRRGPTTTRADDPELDQFMEAYCNMLVKFHEEMARPIQEATEFFNSMER
QLGSTISDSNCEVAGSSEDEQDASWPEEIDPCAEDKELKHQLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWEL
HYKWPYPSETEKMALAETTGLDPKQINNWFINQRKRHWKPASEDMPFAVMEGGFHVAQGTAALYMDRPAVPPFMADGGMY
RLGS

Nucleotide Sequence
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ATGGATAGCTTCGGGGATCTTGGCG...

Zm00001eb058930_T001 from maize genome v5

Amino Acid Sequence
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MDSFGDLGGGGSSSSRAASAPFLQLPLPASTSSSAQQQQVFPPPDGPQQQHYHHSSRIPLRQLLLLADPSSAAQHSHRKA
DMATVQGEMSSPAADGDADAIKARIMSHPQYSALLAAYLDCQKVGAPPDVSDRLSAMAAANLDAQPGPISRRRGPTTTRA
DDPELDQFMEAYCNMLVKFHEEMARPIQEATEFFNSMERQLGSTISDSNCEVAGSSEDEQDASWPEEIDPCAEDKELKHQ
LLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALAETTGLDPKQINNWFINQRKRHWKPA
SEDMPFAVMEGGFHVAQGTAALYMDRPAVPPFMADGGMYRLGS

Nucleotide Sequence
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TTGTTCCCGTCGTCCGATCCATTTG...


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